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SeqOne

Bioinformatics Engineer – Oncology, Hematology

SeqOne

. Design and develop tools and pipelines for complex biological data .

Posted 10/25/2026full-timeParis • FranceJuniorMid-Level💰 €32,000 - €48,000 per yearWebsite

Core Competencies

Role fit
Core Competencies

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Demonstrates expertise in bioinformatics development with a strong focus on Python, UNIX/Linux, and workflow management tools. Capable of leading code quality efforts and collaborating with scientific teams to translate complex biological data into reliable software solutions.

Highest-signal resume keywords
Bioinformatics DevelopmentPython ProficiencyExperience With Workflow ManagersCI/CD Pipeline ExperienceOncohematology Expertise

ATS Keywords

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Applicant Tracking System Keywords

Tip: use these terms in your resume and cover letter to boost ATS matches.

Hard Skills
PythonUNIX/LinuxBashSnakemakeNextflowGitDockerCI/CDHPCCloud
Soft Skills
Clear Communication SkillsTeam CollaborationAnalytical Problem-SolvingAutonomy
Tools & Technologies
GitLab CIGitHub ActionsEnvironment ManagersSLURMAWSGCPAzure
Certifications & Qualifications
Master’s DegreePhD or Equivalent Research Experience
Industry Keywords
BioinformaticsOncohematologyReproducible ResearchCoding StandardsComplex Biological Data

Tech Stack

Tools & technologies
AWSAzureCloudDockerGoogle Cloud PlatformGroovyLinuxPerlPythonRustUnix

About the role

Key responsibilities & impact
  • Design and develop tools and pipelines for complex biological data
  • Maintain and improve existing applications
  • Troubleshoot and resolve user issues
  • Optimize performance and reliability
  • Ensure reproducible and robust results
  • Collaborate closely with scientific teams
  • Contribute to publications and presentations
  • Lead code reviews
  • Enforce coding standards and secure practices
  • Track new methods and technologies and integrate them when relevant
  • Create documentation
  • Provide training and guidance for users and teammates
  • Partner with research and product teams to translate scientific needs into reliable software
  • Lead code quality efforts, including reviews, testing, and CI/CD
  • Help the team adopt best practices so complex analyses become routine, reproducible, and scalable

Requirements

What you’ll need
  • Experience mandatory in Oncohematology
  • Master’s degree (Bac+5) in Bioinformatics, CS or a related field
  • At least 2 years of experience in bioinformatics development
  • Strong proficiency in Python, UNIX/Linux, and Bash
  • Experience with workflow managers (Snakemake, Nextflow)
  • Familiarity with Git (branching, PRs, code reviews)
  • Experience with Docker for creating reproducible environments
  • Clear communication skills
  • Ability to work effectively in a team
  • Autonomy in managing tasks
  • Strong analytical problem-solving abilities
  • A PhD or equivalent research experience is a plus
  • Experience with CI/CD pipelines (GitLab CI, GitHub Actions) is advantageous
  • Knowledge of environment managers such as pyenv, poetry or virtual environments
  • Experience with HPC or Cloud (SLURM, AWS/GCP/Azure) is a strong asset
  • Proficiency in additional programming languages such as R, Perl, Groovy, Nim or Rust is welcomed

Benefits

Comp & perks
  • Remote work options
  • Flexible hours
  • Competitive benefits
  • Internal career development
  • Continuous training
  • Participation in scientific conferences
  • Fixed salary
  • Bonus
  • Free health insurance
  • Flexible working arrangements, including hybrid, on-site, or full remote options